<?xml version="1.0"?>


<!DOCTYPE rdf:RDF [
    <!ENTITY owl "http://www.w3.org/2002/07/owl#" >
    <!ENTITY p2 "http://purl.org/dc/elements/1.1/" >
    <!ENTITY xsd "http://www.w3.org/2001/XMLSchema#" >
    <!ENTITY rdfs "http://www.w3.org/2000/01/rdf-schema#" >
    <!ENTITY rdf "http://www.w3.org/1999/02/22-rdf-syntax-ns#" >
    <!ENTITY p1 "http://ontology.dumontierlab.com/atom-primitive#" >
]>


<rdf:RDF xmlns="http://ontology.dumontierlab.com/atom-common-1.0.owl"
     xml:base="http://ontology.dumontierlab.com/atom-common-1.0.owl"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:p2="http://purl.org/dc/elements/1.1/"
     xmlns:p1="http://ontology.dumontierlab.com/atom-primitive#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <owl:Ontology rdf:about="">
        <p2:creator rdf:datatype="&xsd;string"
            >Michel Dumontier</p2:creator>
        <p2:language rdf:datatype="&xsd;string">en</p2:language>
        <p2:format rdf:datatype="&xsd;string"
            >application/rdf+xml</p2:format>
        <p2:description rdf:datatype="&xsd;string"
            >Ontology of atoms common in organic chemistry</p2:description>
        <p2:date rdf:datatype="&xsd;date">2007-06-01</p2:date>
        <owl:versionInfo rdf:datatype="&xsd;string">1.0</owl:versionInfo>
        <p2:publisher rdf:datatype="&xsd;string">Dumontier Lab</p2:publisher>
        <p2:title rdf:datatype="&xsd;string"
            >Atom Ontology (common)</p2:title>
        <owl:imports>
            <owl:Ontology rdf:about="http://ontology.dumontierlab.com/annotation"/>
        </owl:imports>
    </owl:Ontology>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////
    //
    //   OWL Classes
    //
    ///////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- Class: http://ontology.dumontierlab.com/atom-primitive#AstatineAtom -->

    <owl:Class rdf:about="&p1;AstatineAtom">
        <rdfs:subClassOf>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:subClassOf>
    </owl:Class>
    


    <!-- Class: http://ontology.dumontierlab.com/atom-primitive#Atom -->

    <owl:Class rdf:about="&p1;Atom"/>
    


    <!-- Class: http://ontology.dumontierlab.com/atom-primitive#BromineAtom -->

    <owl:Class rdf:about="&p1;BromineAtom">
        <rdfs:subClassOf>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:subClassOf>
    </owl:Class>
    


    <!-- Class: http://ontology.dumontierlab.com/atom-primitive#CarbonAtom -->

    <owl:Class rdf:about="&p1;CarbonAtom">
        <rdfs:subClassOf>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:subClassOf>
    </owl:Class>
    


    <!-- Class: http://ontology.dumontierlab.com/atom-primitive#ChlorineAtom -->

    <owl:Class rdf:about="&p1;ChlorineAtom">
        <rdfs:subClassOf>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:subClassOf>
    </owl:Class>
    


    <!-- Class: http://ontology.dumontierlab.com/atom-primitive#FluorineAtom -->

    <owl:Class rdf:about="&p1;FluorineAtom">
        <rdfs:subClassOf>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:subClassOf>
    </owl:Class>
    


    <!-- Class: http://ontology.dumontierlab.com/atom-primitive#HalogenAtom -->

    <owl:Class rdf:about="&p1;HalogenAtom">
        <rdfs:subClassOf>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:subClassOf>
        <owl:equivalentClass>
            <owl:Class>
                <owl:unionOf rdf:parseType="Collection">
                    <owl:Class rdf:about="&p1;BromineAtom"/>
                    <owl:Class rdf:about="&p1;IodineAtom"/>
                    <owl:Class rdf:about="&p1;AstatineAtom"/>
                    <owl:Class rdf:about="&p1;FluorineAtom"/>
                    <owl:Class rdf:about="&p1;ChlorineAtom"/>
                </owl:unionOf>
            </owl:Class>
        </owl:equivalentClass>
    </owl:Class>
    


    <!-- Class: http://ontology.dumontierlab.com/atom-primitive#HeteroAtom -->

    <owl:Class rdf:about="&p1;HeteroAtom">
        <rdfs:subClassOf>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:subClassOf>
        <owl:equivalentClass>
            <owl:Class>
                <owl:unionOf rdf:parseType="Collection">
                    <owl:Class rdf:about="&p1;HalogenAtom"/>
                    <owl:Class rdf:about="&p1;SulfurAtom"/>
                    <owl:Class rdf:about="&p1;NitrogenAtom"/>
                    <owl:Class rdf:about="&p1;OxygenAtom"/>
                </owl:unionOf>
            </owl:Class>
        </owl:equivalentClass>
    </owl:Class>
    


    <!-- Class: http://ontology.dumontierlab.com/atom-primitive#HydrogenAtom -->

    <owl:Class rdf:about="&p1;HydrogenAtom">
        <rdfs:subClassOf>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:subClassOf>
    </owl:Class>
    


    <!-- Class: http://ontology.dumontierlab.com/atom-primitive#IodineAtom -->

    <owl:Class rdf:about="&p1;IodineAtom">
        <rdfs:subClassOf>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:subClassOf>
    </owl:Class>
    


    <!-- Class: http://ontology.dumontierlab.com/atom-primitive#NitrogenAtom -->

    <owl:Class rdf:about="&p1;NitrogenAtom">
        <rdfs:subClassOf>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:subClassOf>
    </owl:Class>
    


    <!-- Class: http://ontology.dumontierlab.com/atom-primitive#OxygenAtom -->

    <owl:Class rdf:about="&p1;OxygenAtom">
        <rdfs:subClassOf>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:subClassOf>
    </owl:Class>
    


    <!-- Class: http://ontology.dumontierlab.com/atom-primitive#PhosphorusAtom -->

    <owl:Class rdf:about="&p1;PhosphorusAtom">
        <rdfs:subClassOf>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:subClassOf>
    </owl:Class>
    


    <!-- Class: http://ontology.dumontierlab.com/atom-primitive#SulfurAtom -->

    <owl:Class rdf:about="&p1;SulfurAtom">
        <rdfs:subClassOf>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:subClassOf>
    </owl:Class>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////
    //
    //   OWL Object Properties
    //
    ///////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- Object property: http://ontology.dumontierlab.com/atom-primitive#hasAromaticBondWith -->

    <owl:ObjectProperty rdf:about="&p1;hasAromaticBondWith">
        <rdfs:subPropertyOf>
            <owl:ObjectProperty rdf:about="&p1;hasBondWith"/>
        </rdfs:subPropertyOf>
        <rdf:type rdf:resource="&owl;SymmetricProperty"/>
        <rdfs:domain>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:domain>
        <rdfs:range>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:range>
    </owl:ObjectProperty>
    


    <!-- Object property: http://ontology.dumontierlab.com/atom-primitive#hasBondWith -->

    <owl:ObjectProperty rdf:about="&p1;hasBondWith">
        <rdf:type rdf:resource="&owl;SymmetricProperty"/>
        <rdfs:domain>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:domain>
        <rdfs:range>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:range>
    </owl:ObjectProperty>
    


    <!-- Object property: http://ontology.dumontierlab.com/atom-primitive#hasDoubleBondWith -->

    <owl:ObjectProperty rdf:about="&p1;hasDoubleBondWith">
        <rdfs:subPropertyOf>
            <owl:ObjectProperty rdf:about="&p1;hasBondWith"/>
        </rdfs:subPropertyOf>
        <rdf:type rdf:resource="&owl;SymmetricProperty"/>
        <rdfs:domain>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:domain>
        <rdfs:range>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:range>
    </owl:ObjectProperty>
    


    <!-- Object property: http://ontology.dumontierlab.com/atom-primitive#hasSingleBondWith -->

    <owl:ObjectProperty rdf:about="&p1;hasSingleBondWith">
        <rdfs:subPropertyOf>
            <owl:ObjectProperty rdf:about="&p1;hasBondWith"/>
        </rdfs:subPropertyOf>
        <rdf:type rdf:resource="&owl;SymmetricProperty"/>
        <rdfs:domain>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:domain>
        <rdfs:range>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:range>
    </owl:ObjectProperty>
    


    <!-- Object property: http://ontology.dumontierlab.com/atom-primitive#hasTripleBondWith -->

    <owl:ObjectProperty rdf:about="&p1;hasTripleBondWith">
        <rdfs:subPropertyOf>
            <owl:ObjectProperty rdf:about="&p1;hasBondWith"/>
        </rdfs:subPropertyOf>
        <rdf:type rdf:resource="&owl;SymmetricProperty"/>
        <rdfs:domain>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:domain>
        <rdfs:range>
            <owl:Class rdf:about="&p1;Atom"/>
        </rdfs:range>
    </owl:ObjectProperty>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////
    //
    //   OWL Annotation Properties
    //
    ///////////////////////////////////////////////////////////////////////////
     -->

    <owl:AnnotationProperty rdf:about="&p2;date"/>
    <owl:AnnotationProperty rdf:about="&p2;publisher"/>
    <owl:AnnotationProperty rdf:about="&p2;title"/>
    <owl:AnnotationProperty rdf:about="&p2;language"/>
    <owl:AnnotationProperty rdf:about="&p2;description"/>
    <owl:AnnotationProperty rdf:about="&p2;format"/>
    <owl:AnnotationProperty rdf:about="&p2;creator"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////
    //
    //   OWL Axioms
    //
    ///////////////////////////////////////////////////////////////////////////
     -->

    <owl:Class rdf:about="&p1;FluorineAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;ChlorineAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;ChlorineAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;FluorineAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;PhosphorusAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;OxygenAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;OxygenAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;PhosphorusAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;AstatineAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;ChlorineAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;ChlorineAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;AstatineAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;CarbonAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;OxygenAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;OxygenAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;CarbonAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;NitrogenAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;OxygenAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;OxygenAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;NitrogenAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;BromineAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;HydrogenAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;HydrogenAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;BromineAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;BromineAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;NitrogenAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;NitrogenAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;BromineAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;PhosphorusAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;ChlorineAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;ChlorineAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;PhosphorusAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;IodineAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;NitrogenAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;NitrogenAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;IodineAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;PhosphorusAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;CarbonAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;CarbonAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;PhosphorusAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;IodineAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;FluorineAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;FluorineAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;IodineAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;AstatineAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;HydrogenAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;HydrogenAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;AstatineAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;BromineAtom">
        <owl:disjointWith>
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        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;AstatineAtom">
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        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;HydrogenAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;OxygenAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;OxygenAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;HydrogenAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;IodineAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;AstatineAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;AstatineAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;IodineAtom"/>
        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;HydrogenAtom">
        <owl:disjointWith>
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    <owl:Class rdf:about="&p1;NitrogenAtom">
        <owl:disjointWith>
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    <owl:Class rdf:about="&p1;CarbonAtom">
        <owl:disjointWith>
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    <owl:Class rdf:about="&p1;ChlorineAtom">
        <owl:disjointWith>
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    <owl:Class rdf:about="&p1;SulfurAtom">
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    <owl:Class rdf:about="&p1;ChlorineAtom">
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    <owl:Class rdf:about="&p1;ChlorineAtom">
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    <owl:Class rdf:about="&p1;AstatineAtom">
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    <owl:Class rdf:about="&p1;FluorineAtom">
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    <owl:Class rdf:about="&p1;FluorineAtom">
        <owl:disjointWith>
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        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;NitrogenAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;FluorineAtom"/>
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    </owl:Class>
    <owl:Class rdf:about="&p1;IodineAtom">
        <owl:disjointWith>
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        </owl:disjointWith>
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    <owl:Class rdf:about="&p1;CarbonAtom">
        <owl:disjointWith>
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        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;IodineAtom">
        <owl:disjointWith>
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        </owl:disjointWith>
    </owl:Class>
    <owl:Class rdf:about="&p1;PhosphorusAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;IodineAtom"/>
        </owl:disjointWith>
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    <owl:Class rdf:about="&p1;PhosphorusAtom">
        <owl:disjointWith>
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    <owl:Class rdf:about="&p1;SulfurAtom">
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    <owl:Class rdf:about="&p1;CarbonAtom">
        <owl:disjointWith>
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    </owl:Class>
    <owl:Class rdf:about="&p1;FluorineAtom">
        <owl:disjointWith>
            <owl:Class rdf:about="&p1;CarbonAtom"/>
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    <owl:Class rdf:about="&p1;IodineAtom">
        <owl:disjointWith>
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    <owl:Class rdf:about="&p1;HydrogenAtom">
        <owl:disjointWith>
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    <owl:Class rdf:about="&p1;IodineAtom">
        <owl:disjointWith>
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    <owl:Class rdf:about="&p1;SulfurAtom">
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    <owl:Class rdf:about="&p1;BromineAtom">
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    <owl:Class rdf:about="&p1;PhosphorusAtom">
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    <owl:Class rdf:about="&p1;OxygenAtom">
        <owl:disjointWith>
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    <owl:Class rdf:about="&p1;ChlorineAtom">
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    <owl:Class rdf:about="&p1;FluorineAtom">
        <owl:disjointWith>
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